with_AGI_gene
OMAT2P109600
0.83182800000000001184
<html><body><title>OMAT2P109600</title>(↑ Click "Links", if this line appears at the beginning.)<br><H1>Other supporting information</H1><table><tr><td colspan="2" align="left"><b>Gene Model</b><br></td></tr><tr><td NOWRAP width="75"></td><td NOWRAP><img src="/dbfiles/SciNetS_ria227i/cria227s1i/cria227s1ria227u201096000000i/OMAT2P109600.gene_models.png" width="717"><br></td></tr><tr><td colspan=2 align="left"><b>Correlation Plot</b><br></td></tr><tr><td NOWRAP colspan="2" align="left"><img src="/dbfiles/SciNetS_ria227i/cria227s1i/cria227s1ria227u201096000000i/OMAT2P109600.CorrPlot.jpg" width="800"><br><br></td></tr></table><hr><b>Expression profile (Values are plotted in Log(2) values.)</b><br><img src="/dbfiles/SciNetS_ria227i/cria227s1i/cria227s1ria227u201096000000i/OMAT2P109600.F0.Expression.png"><br><hr><b>Genes with related expresssion profiles.</b><br><table border=1><tr><th colspan=7 align="left">Positively Correlated Genes</th></tr><tr><th>Gens</th><th>PCC</th><th>Definition</th><th>Overlap gene</th><th>Definition</th><th>Overlap gene(antisense)</th><th>Definition</th></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u400080100000i">OMAT4P008010</a></td><td>0.970079</td><td>-</td><td>AT4G25630,AT4G25631</td><td>[AT4G25630]FIB2 (FIBRILLARIN 2), [AT4G25631]U60.2F</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u401015300000i">OMAT4P101530</a></td><td>0.969652</td><td>-</td><td>AT4G05410</td><td>transducin family protein / WD-40 repeat family protein</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u201113600000i">OMAT2P111360</a></td><td>0.968385</td><td>-</td><td>AT2G44120</td><td>60S ribosomal protein L7 (RPL7C)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u301078900000i">OMAT3P107890</a></td><td>0.965301</td><td>-</td><td>AT3G23830</td><td>GRP4 (GLYCINE-RICH RNA-BINDING PROTEIN 4)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u301141200000i">OMAT3P114120</a></td><td>0.964743</td><td>-</td><td>AT3G57290</td><td>EIF3E (EUKARYOTIC TRANSLATION INITIATION FACTOR 3E)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u301136500000i">OMAT3P113650</a></td><td>0.963791</td><td>-</td><td>AT3G56070</td><td>ROC2 (ROTAMASE CYCLOPHILIN 2)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u301056700000i">OMAT3P105670</a></td><td>0.960858</td><td>-</td><td>AT3G16810</td><td>APUM24 (Arabidopsis Pumilio 24)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u301157400000i">OMAT3P115740</a></td><td>0.960225</td><td>-</td><td>AT3G62870</td><td>60S ribosomal protein L7A (RPL7aB)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u101051700000i">OMAT1P105170</a></td><td>0.960106</td><td>-</td><td>AT1G15440</td><td>transducin family protein / WD-40 repeat family protein</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u101106100000i">OMAT1P110610</a></td><td>0.960063</td><td>-</td><td>AT1G34030</td><td>40S ribosomal protein S18 (RPS18B)</td><td>-</td><td>-</td></tr><tr><th colspan=7 align="left">Negatively Correlated Genes</th></tr><tr><th>Gens</th><th>PCC</th><th>Definition</th><th>Overlap gene</th><th>Definition</th><th>Overlap gene(antisense)</th><th>Definition</th></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u200021800000i">OMAT2P002180</a></td><td>-0.731059</td><td>-</td><td>AT2G16050</td><td>FUNCTIONS IN: molecular_function unknown</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u500083300000i">OMAT5P008330</a></td><td>-0.697127</td><td>-</td><td>AT5G24450</td><td>unknown protein</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u100075400000i">OMAT1P007540</a></td><td>-0.687756</td><td>-</td><td>AT1G20620</td><td>CAT3 (CATALASE 3)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u500197300000i">OMAT5P019730</a></td><td>-0.687342</td><td>-</td><td>AT5G64240</td><td>AtMC3 (metacaspase 3)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u401070100000i">OMAT4P107010</a></td><td>-0.678977</td><td>-</td><td>AT4G25650</td><td>ACD1-LIKE (ACD1-LIKE)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u301009000000i">OMAT3P100900</a></td><td>-0.671576</td><td>-</td><td>AT3G03150</td><td>unknown protein</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u500007300000i">OMAT5P000730</a></td><td>-0.66216</td><td>-</td><td>AT5G02790</td><td>In2-1 protein, putative</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u401042300000i">OMAT4P104230</a></td><td>-0.662075</td><td>-</td><td>AT4G17170</td><td>RABB1C (ARABIDOPSIS RAB GTPASE HOMOLOG B1C)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u100242900000i">OMAT1P024290</a></td><td>-0.661684</td><td>-</td><td>AT1G80960</td><td>F-box protein-related</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u101021600000i">OMAT1P102160</a></td><td>-0.659657</td><td>-</td><td>AT1G07310</td><td>C2 domain-containing protein</td><td>-</td><td>-</td></tr></table><br><a href="/dbfiles/SciNetS_ria227i/cria227s1i/cria227s1ria227u201096000000i/OMAT2P109600-correlation.txt">Get whole results</a><br><br> <HR><b>Over-Representation Analysis Result</b><br><br><table border="1"><tr bgcolor=#FF69B4><td></td><td><i>p</i>-value</td><td> <= 3.89e-35</td><td>:20 terms with high significance</td></a></tr><tr bgcolor=#FFFACD><td>3.89e-35 < </td><td><i>p</i>-value</td><td> <= 8.76e-06</td><td> :With considering multiple testing correction;<br><i>p</i> <= 1.00e-02 / 1142</td></tr><tr bgcolor=#FFFFFF><td>8.76e-06 < </td><td><i>p</i>-value</td><td> <= 1.00e-02</td><td></td></tr></table><br><table border="1"><tr><th>Type of term (*1)</th><th>Depth of the term in ontology tree</th><th>ID/Term</th><th>Description</th><th>Number of genes</th><th>Over-Representative rate (*2)</th><th><i>p</i>-value (*3)</th><th>PosMed <i>p</i>-value (*4)<br> (Link to PosMed)</th><th>Found on gene annotation</th></tr><tr bgcolor=#FFFACD><td>B</td><td>5</td><td>GO:0006412</td><td>translation</td><td>56/201</td><td>7.68</td><td>1.02e-34</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0042254</td><td>ribosome biogenesis</td><td>27/201</td><td>20.97</td><td>3.34e-29</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>B</td><td>3</td><td>GO:0022613</td><td>ribonucleoprotein complex biogenesis</td><td>27/201</td><td>20.30</td><td>8.49e-29</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0010467</td><td>gene expression</td><td>78/201</td><td>3.81</td><td>1.03e-27</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT2G39390&keyword=gene%20expression">1.29E-17</a></td><td>yes</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0044260</td><td>cellular macromolecule metabolic process</td><td>88/201</td><td>2.48</td><td>1.45e-18</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>B</td><td>5</td><td>GO:0044267</td><td>cellular protein metabolic process</td><td>63/201</td><td>3.07</td><td>3.33e-17</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>B</td><td>3</td><td>GO:0043170</td><td>macromolecule metabolic process</td><td>90/201</td><td>2.31</td><td>5.19e-17</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0019538</td><td>protein metabolic process</td><td>65/201</td><td>2.80</td><td>9.28e-16</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>B</td><td>5</td><td>GO:0034645</td><td>cellular macromolecule biosynthetic process</td><td>62/201</td><td>2.86</td><td>2.03e-15</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0009059</td><td>macromolecule biosynthetic process</td><td>62/201</td><td>2.85</td><td>2.35e-15</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>B</td><td>5</td><td>GO:0006396</td><td>RNA processing</td><td>20/201</td><td>8.99</td><td>1.20e-14</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>3</td><td>GO:0044237</td><td>cellular metabolic process</td><td>96/201</td><td>2.02</td><td>2.09e-14</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0044249</td><td>cellular biosynthetic process</td><td>70/201</td><td>2.48</td><td>3.02e-14</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>B</td><td>3</td><td>GO:0044238</td><td>primary metabolic process</td><td>98/201</td><td>1.97</td><td>5.51e-14</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>B</td><td>5</td><td>GO:0006364</td><td>rRNA processing</td><td>12/201</td><td>19.09</td><td>7.34e-14</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>3</td><td>GO:0009058</td><td>biosynthetic process</td><td>70/201</td><td>2.39</td><td>1.69e-13</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>B</td><td>5</td><td>GO:0009451</td><td>RNA modification</td><td>11/201</td><td>14.44</td><td>1.82e-11</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>5</td><td>GO:0016070</td><td>RNA metabolic process</td><td>23/201</td><td>2.69</td><td>5.40e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0006139</td><td>nucleobase, nucleoside, nucleotide and nucleic acid metabolic process</td><td>33/201</td><td>1.95</td><td>7.42e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>5</td><td>GO:0090304</td><td>nucleic acid metabolic process</td><td>29/201</td><td>1.92</td><td>2.44e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0034641</td><td>cellular nitrogen compound metabolic process</td><td>34/201</td><td>1.74</td><td>5.04e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0006807</td><td>nitrogen compound metabolic process</td><td>34/201</td><td>1.71</td><td>7.18e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0009628</td><td>response to abiotic stimulus</td><td>14/201</td><td>1.88</td><td>8.20e-03</td><td>-</td><td>no</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FF69B4><td>C</td><td>3</td><td>GO:0043228</td><td>non-membrane-bounded organelle</td><td>77/201</td><td>12.86</td><td>1.84e-65</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>C</td><td>4</td><td>GO:0043232</td><td>intracellular non-membrane-bounded organelle</td><td>77/201</td><td>12.86</td><td>1.84e-65</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>C</td><td>3</td><td>GO:0030529</td><td>ribonucleoprotein complex</td><td>62/201</td><td>17.69</td><td>7.27e-61</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>C</td><td>4</td><td>GO:0005840</td><td>ribosome</td><td>54/201</td><td>20.97</td><td>4.75e-57</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>C</td><td>5</td><td>GO:0022626</td><td>cytosolic ribosome</td><td>46/201</td><td>24.87</td><td>3.03e-52</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>C</td><td>4</td><td>GO:0033279</td><td>ribosomal subunit</td><td>44/201</td><td>26.96</td><td>1.12e-51</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>C</td><td>5</td><td>GO:0044445</td><td>cytosolic part</td><td>40/201</td><td>26.58</td><td>8.30e-47</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>C</td><td>3</td><td>GO:0044446</td><td>intracellular organelle part</td><td>82/201</td><td>5.69</td><td>5.13e-42</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>C</td><td>3</td><td>GO:0044422</td><td>organelle part</td><td>82/201</td><td>5.69</td><td>5.47e-42</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>C</td><td>5</td><td>GO:0005730</td><td>nucleolus</td><td>35/201</td><td>20.32</td><td>9.18e-37</td><td>-</td><td>no</td></tr><tr bgcolor=#FF69B4><td>C</td><td>4</td><td>GO:0070013</td><td>intracellular organelle lumen</td><td>40/201</td><td>14.67</td><td>6.02e-36</td><td>-</td><td>no</td></tr><tr bgcolor=#FF69B4><td>C</td><td>3</td><td>GO:0043233</td><td>organelle lumen</td><td>40/201</td><td>14.64</td><td>6.59e-36</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>C</td><td>5</td><td>GO:0005829</td><td>cytosol</td><td>44/201</td><td>10.58</td><td>3.41e-33</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT2G39390&keyword=cytosol">3.64E-21</a></td><td>yes</td></tr><tr bgcolor=#FFFACD><td>C</td><td>5</td><td>GO:0031981</td><td>nuclear lumen</td><td>36/201</td><td>14.82</td><td>1.23e-32</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>C</td><td>3</td><td>GO:0044424</td><td>intracellular part</td><td>130/201</td><td>2.54</td><td>2.17e-32</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>C</td><td>3</td><td>GO:0005622</td><td>intracellular</td><td>132/201</td><td>2.47</td><td>8.09e-32</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>C</td><td>5</td><td>GO:0015934</td><td>large ribosomal subunit</td><td>26/201</td><td>28.12</td><td>8.31e-32</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>C</td><td>3</td><td>GO:0043229</td><td>intracellular organelle</td><td>120/201</td><td>2.59</td><td>1.52e-29</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>C</td><td>4</td><td>GO:0044428</td><td>nuclear part</td><td>37/201</td><td>11.07</td><td>8.66e-29</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>C</td><td>4</td><td>GO:0044444</td><td>cytoplasmic part</td><td>95/201</td><td>2.72</td><td>2.62e-23</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>C</td><td>4</td><td>GO:0005737</td><td>cytoplasm</td><td>97/201</td><td>2.58</td><td>4.07e-22</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>C</td><td>5</td><td>GO:0015935</td><td>small ribosomal subunit</td><td>18/201</td><td>25.45</td><td>6.07e-22</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>C</td><td>4</td><td>GO:0043231</td><td>intracellular membrane-bounded organelle</td><td>95/201</td><td>2.15</td><td>5.28e-16</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>C</td><td>3</td><td>GO:0043227</td><td>membrane-bounded organelle</td><td>95/201</td><td>2.15</td><td>5.32e-16</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>C</td><td>3</td><td>GO:0044464</td><td>cell part</td><td>143/201</td><td>1.56</td><td>8.04e-14</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>C</td><td>5</td><td>GO:0005634</td><td>nucleus</td><td>47/201</td><td>2.99</td><td>2.01e-12</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>C</td><td>5</td><td>GO:0005739</td><td>mitochondrion</td><td>25/201</td><td>3.89</td><td>1.69e-09</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>C</td><td>4</td><td>GO:0044429</td><td>mitochondrial part</td><td>10/201</td><td>7.13</td><td>1.93e-07</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>C</td><td>4</td><td>GO:0005886</td><td>plasma membrane</td><td>30/201</td><td>2.41</td><td>2.52e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>C</td><td>3</td><td>GO:0016020</td><td>membrane</td><td>50/201</td><td>1.82</td><td>7.08e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>C</td><td>4</td><td>GO:0005618</td><td>cell wall</td><td>11/201</td><td>3.30</td><td>1.48e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>C</td><td>3</td><td>GO:0030312</td><td>external encapsulating structure</td><td>11/201</td><td>3.27</td><td>1.58e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>C</td><td>5</td><td>GO:0009536</td><td>plastid</td><td>33/201</td><td>1.78</td><td>4.06e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>C</td><td>3</td><td>GO:0043234</td><td>protein complex</td><td>15/201</td><td>2.28</td><td>1.01e-03</td><td>-</td><td>no</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FF69B4><td>M</td><td>3</td><td>GO:0003735</td><td>structural constituent of ribosome</td><td>51/201</td><td>23.44</td><td>1.76e-56</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>M</td><td>4</td><td>GO:0003723</td><td>RNA binding</td><td>25/201</td><td>3.58</td><td>8.98e-09</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>M</td><td>3</td><td>GO:0000166</td><td>nucleotide binding</td><td>29/201</td><td>2.18</td><td>2.41e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>M</td><td>3</td><td>GO:0003676</td><td>nucleic acid binding</td><td>39/201</td><td>1.64</td><td>6.93e-04</td><td>-</td><td>no</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FF69B4><td>PS</td><td>5</td><td>PO:0020038</td><td>petiole</td><td>161/201</td><td>2.10</td><td>3.89e-35</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0009052</td><td>pedicel</td><td>160/201</td><td>1.96</td><td>2.09e-30</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0020039</td><td>leaf lamina</td><td>160/201</td><td>1.93</td><td>1.32e-29</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0000037</td><td>shoot apex</td><td>162/201</td><td>1.87</td><td>1.31e-28</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0000013</td><td>cauline leaf</td><td>153/201</td><td>1.97</td><td>4.35e-28</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009032</td><td>petal</td><td>161/201</td><td>1.83</td><td>8.62e-27</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009005</td><td>root</td><td>162/201</td><td>1.79</td><td>5.44e-26</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0009028</td><td>microsporophyll</td><td>156/201</td><td>1.85</td><td>1.03e-25</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0009025</td><td>leaf</td><td>163/201</td><td>1.76</td><td>1.85e-25</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0008037</td><td>seedling</td><td>159/201</td><td>1.79</td><td>5.83e-25</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0009027</td><td>megasporophyll</td><td>155/201</td><td>1.84</td><td>5.87e-25</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0009026</td><td>sporophyll</td><td>160/201</td><td>1.77</td><td>1.46e-24</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009031</td><td>sepal</td><td>161/201</td><td>1.73</td><td>8.56e-24</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0008034</td><td>leaf whorl</td><td>162/201</td><td>1.71</td><td>2.60e-23</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0008033</td><td>phyllome whorl</td><td>162/201</td><td>1.71</td><td>2.60e-23</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009013</td><td>meristem</td><td>149/201</td><td>1.85</td><td>2.80e-23</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0000230</td><td>inflorescence meristem</td><td>146/201</td><td>1.87</td><td>4.81e-23</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0009009</td><td>embryo</td><td>163/201</td><td>1.68</td><td>1.29e-22</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009010</td><td>seed</td><td>164/201</td><td>1.67</td><td>1.38e-22</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0009001</td><td>fruit</td><td>164/201</td><td>1.66</td><td>2.74e-22</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0006342</td><td>infructescence</td><td>164/201</td><td>1.66</td><td>2.74e-22</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0009047</td><td>stem</td><td>151/201</td><td>1.78</td><td>4.50e-22</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0020030</td><td>cotyledon</td><td>140/201</td><td>1.90</td><td>5.13e-22</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0006001</td><td>phyllome</td><td>166/201</td><td>1.61</td><td>3.10e-21</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009006</td><td>shoot</td><td>167/201</td><td>1.53</td><td>1.24e-18</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0009046</td><td>flower</td><td>163/201</td><td>1.56</td><td>1.68e-18</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0009049</td><td>inflorescence</td><td>163/201</td><td>1.55</td><td>3.55e-18</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0020091</td><td>male gametophyte</td><td>118/201</td><td>1.42</td><td>2.86e-07</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0004013</td><td>epidermal cell</td><td>30/201</td><td>2.50</td><td>1.14e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0000351</td><td>guard mother cell</td><td>28/201</td><td>2.58</td><td>1.41e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0000070</td><td>meristemoid</td><td>28/201</td><td>2.57</td><td>1.46e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0006016</td><td>leaf epidermis</td><td>28/201</td><td>2.51</td><td>2.48e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0005679</td><td>epidermis</td><td>30/201</td><td>2.41</td><td>2.49e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009014</td><td>dermal tissue</td><td>30/201</td><td>2.41</td><td>2.52e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0006035</td><td>shoot epidermis</td><td>28/201</td><td>2.49</td><td>2.84e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0000349</td><td>epidermal initial</td><td>28/201</td><td>2.47</td><td>3.26e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0004011</td><td>initial cell</td><td>28/201</td><td>2.45</td><td>3.69e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0004010</td><td>meristematic cell</td><td>28/201</td><td>2.45</td><td>3.80e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>4</td><td>PO:0000293</td><td>guard cell</td><td>25/201</td><td>2.31</td><td>3.20e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>3</td><td>PO:0000084</td><td>sperm cell</td><td>45/201</td><td>1.38</td><td>8.63e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>3</td><td>PO:0020097</td><td>generative cell</td><td>45/201</td><td>1.38</td><td>8.63e-03</td><td>-</td><td>no</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FFFACD><td>PG</td><td>5</td><td>PO:0001081</td><td>F mature embryo stage</td><td>162/201</td><td>2.03</td><td>2.69e-33</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>5</td><td>PO:0004507</td><td>D bilateral stage</td><td>161/201</td><td>1.94</td><td>2.05e-30</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>5</td><td>PO:0001078</td><td>E expanded cotyledon stage</td><td>161/201</td><td>1.93</td><td>5.79e-30</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>4</td><td>PO:0001054</td><td>4 leaf senescence stage</td><td>155/201</td><td>2.01</td><td>8.48e-30</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>3</td><td>PO:0001050</td><td>leaf development stages</td><td>155/201</td><td>2.00</td><td>9.10e-30</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>3</td><td>PO:0007134</td><td>A vegetative growth</td><td>161/201</td><td>1.89</td><td>9.16e-29</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>5</td><td>PO:0001185</td><td>C globular stage</td><td>158/201</td><td>1.92</td><td>2.29e-28</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>5</td><td>PO:0007133</td><td>leaf production</td><td>159/201</td><td>1.88</td><td>1.10e-27</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>4</td><td>PO:0007112</td><td>1 main shoot growth</td><td>159/201</td><td>1.88</td><td>1.13e-27</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>4</td><td>PO:0007631</td><td>embryo development stages</td><td>162/201</td><td>1.79</td><td>6.00e-26</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>3</td><td>PO:0001170</td><td>seed development stages</td><td>162/201</td><td>1.78</td><td>1.07e-25</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>4</td><td>PO:0007616</td><td>4 anthesis</td><td>161/201</td><td>1.65</td><td>4.36e-21</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>5</td><td>PO:0007604</td><td>corolla developmental stages</td><td>162/201</td><td>1.63</td><td>9.52e-21</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>4</td><td>PO:0007600</td><td>3 floral organ development stages</td><td>162/201</td><td>1.58</td><td>5.08e-19</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>3</td><td>PO:0007615</td><td>flower development stages</td><td>162/201</td><td>1.54</td><td>1.56e-17</td><td>-</td><td>yes</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FF69B4><td>KW</td><td>0</td><td>ribosome</td><td>-</td><td>58/201</td><td>21.86</td><td>1.96e-62</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>KW</td><td>0</td><td>ribosomal</td><td>-</td><td>58/201</td><td>19.12</td><td>6.99e-59</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT2G39390&keyword=ribosomal">0</a></td><td>yes</td></tr><tr bgcolor=#FF69B4><td>KW</td><td>0</td><td>constituent</td><td>-</td><td>52/201</td><td>18.46</td><td>6.59e-52</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>KW</td><td>0</td><td>structural</td><td>-</td><td>53/201</td><td>15.04</td><td>4.74e-48</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>KW</td><td>0</td><td>translation</td><td>-</td><td>59/201</td><td>11.85</td><td>2.03e-47</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>KW</td><td>0</td><td>cytosolic</td><td>-</td><td>41/201</td><td>19.05</td><td>1.26e-41</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>subunit</td><td>-</td><td>56/201</td><td>7.60</td><td>1.80e-34</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>nucleolus</td><td>-</td><td>30/201</td><td>21.96</td><td>7.44e-33</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>large</td><td>-</td><td>25/201</td><td>16.22</td><td>2.95e-24</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>biogenesis</td><td>-</td><td>18/201</td><td>13.18</td><td>2.00e-16</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>transducin</td><td>-</td><td>14/201</td><td>18.99</td><td>1.08e-15</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>ipr015943</td><td>-</td><td>17/201</td><td>11.25</td><td>1.91e-14</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>ipr011046</td><td>-</td><td>17/201</td><td>10.90</td><td>3.30e-14</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>ipr017986</td><td>-</td><td>16/201</td><td>11.87</td><td>4.09e-14</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>eukaryotic</td><td>-</td><td>18/201</td><td>9.11</td><td>1.69e-13</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>ipr001680</td><td>-</td><td>16/201</td><td>10.72</td><td>2.18e-13</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>processing</td><td>-</td><td>15/201</td><td>10.52</td><td>1.43e-12</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>small</td><td>-</td><td>22/201</td><td>5.43</td><td>2.36e-11</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>nucleotide</td><td>-</td><td>26/201</td><td>4.07</td><td>3.11e-10</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>mitochondrial</td><td>-</td><td>15/201</td><td>6.62</td><td>1.38e-09</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>conserved</td><td>-</td><td>37/201</td><td>2.72</td><td>7.44e-09</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>components</td><td>-</td><td>12/201</td><td>7.35</td><td>1.22e-08</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>mitochondrion</td><td>-</td><td>20/201</td><td>3.63</td><td>1.87e-07</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>complex</td><td>-</td><td>25/201</td><td>2.94</td><td>4.43e-07</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>defective</td><td>-</td><td>12/201</td><td>4.88</td><td>1.36e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>repeat</td><td>-</td><td>28/201</td><td>2.15</td><td>4.53e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>region</td><td>-</td><td>29/201</td><td>2.00</td><td>1.23e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>nucleic</td><td>-</td><td>15/201</td><td>2.28</td><td>9.96e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>alpha</td><td>-</td><td>16/201</td><td>2.18</td><td>1.18e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>motif</td><td>-</td><td>12/201</td><td>2.46</td><td>1.36e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>membrane</td><td>-</td><td>41/201</td><td>1.53</td><td>1.85e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>ubiquitin</td><td>-</td><td>11/201</td><td>2.44</td><td>2.09e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>terminal</td><td>-</td><td>31/201</td><td>1.60</td><td>3.25e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>plasma</td><td>-</td><td>20/201</td><td>1.74</td><td>5.89e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>chloroplast</td><td>-</td><td>28/201</td><td>1.58</td><td>5.94e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>intracellular</td><td>-</td><td>11/201</td><td>2.12</td><td>6.25e-03</td><td>-</td><td>no</td></tr></table><table><tr><td valign=top>(*1)</td><td>[B]:Biological process(Gene ontology), [C]:Cellular component(Gene ontology), [M]:Molecular function(Gene ontology), [PS]:Plant Structure(Plant ontology), [PG]:Growth and developmental stages(Plant ontology), [KW]:words found in gene description.</td></tr><tr><td valign=top>(*2)</td><td>([# of genes with the term] / [# of sampling (200)]) / ([# of genes with the term among whole genes] / [# of whole genes]) </td></tr><tr><td valign=top>(*3)</td><td>P-values were calculated on hypergeometric distribution in which we found <i>n</i> genes with a annotation term during 200 highly correlated genes, while we had <i>N</i> genes with the term in the whole genes.</td></tr><tr><td valign=top>(*4)</td><td><a href="http://omicspace.riken.jp/PosMed-plus/">PosMed</a> is a system which serve a p-values showing a relationship between the gene and the annotation term based on literature information and Gene-Gene interaction suchas co-expression or protein-protein interactions.</td></tr></table><hr><a href="/db/SciNetS_ria227i/cria227s904i">Top Page</a></body></html>